Browsing by Author "Caki, Z"

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    Relationship Between Chronic Tinnitus and Glial Cell Line-Derived Neurotrophic Factor Gene rs3812047, rs1110149, and rs884344 Polymorphisms in a Turkish Population
    Orenay-Boyacioglu, S; Coskunoglu, A; Caki, Z; Cam, FS
    Glial cell line-derived neurotrophic factor (GDNF) plays a key role in early development of central auditory pathway and the inner ear. However, the auditory pathway studies of GDNF gene polymorphisms are scarce in the literature, and the studies especially associated with tinnitus are limited. Our study aimed to identify whether GDNF gene polymorphisms play any roles in the pathophysiology of tinnitus by investigating the relationship between tinnitus and GDNF polymorphisms. A total of 52 patients with chronic tinnitus and ages ranging from 18 to 55 were admitted to the Ear-Nose-Throat outpatient clinic of Celal Bayar University Medical Faculty Hospital of Manisa, Turkey and constituted the study group. Another 42 patients of the same age range, without tinnitus symptoms and lacking any systemic disease, were also admitted to the clinic and formed the control group. The tympanometric, audiological, and psychoacoustic assessments of the subjects were performed. Deoxyribonucleic acid samples obtained using venous blood taken for routine inspections were used to investigate GDNF gene polymorphisms (rs884344, rs3812047, and rs1110149) by polymerase chain reaction-based restriction fragment length polymorphism method. No correlation could be detected between GDNF rs884344 and rs3812047 polymorphisms and subjects with tinnitus (p > 0.05). Heterozygosity was significantly lower for GDNF rs1110149 polymorphism in tinnitus subjects compared to the controls (p < 0.05). However, the allele frequencies for all 3 polymorphisms were not significantly different between tinnitus and control groups (p > 0.05). Failure to detect correlations between tinnitus and GDNF gene polymorphisms suggests this may be due to the fact that the GDNF gene has a variable expression pattern in different tissues and pathologies. Therefore, the study should be improved and its scope should be expanded by including a larger group of patients and different tissues to investigate the expression pattern of GDNF.
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    Assessment of in vitro antitumoral and antimicrobial activities of marine algae harvested from the eastern Mediterranean sea
    Taskin, E; Caki, Z; Ozturk, M; Taskin, E
    Antitumoral activities of five algal extracts obtained from the marine algae Scytosiphon lomentaria, Padina pavonica, Cystoseira mediterranea (Phaeophyceae), Hypnea musciformis and Spyridia filamentosa (Rhodophyta) were assessed against the human breast adenocarcinoma cell line MCF-7 and the human prostate carcinoma epithelium like cell lines DU 145, LNCaP, PC3 using the cytotoxic assay, in vitro. The crude extract of S. filamentosa showed strong cytotoxic activity against the DU-145 cell line, and it showed less than 10% cell viability after treatment. Antimicrobial activities of the crude extracts of algae (with the exception of H. musciformis) were also tested by disc diffusion assay against three Gram positive and five Gram negative bacterial strains and against the yeast pathogen Candida albicans. Among the extraxts, S. lomentaria extract (prepared with methanol) inhibited highly Gram negative bacterium Salmonella typhimurium growth while C. albicans growth was only inhibited by C. mediterrranea extract.